2 May 2017
rmarkdown?
+ 
+ 
Markdown is used to format the text
<h1></h1> in HTML)<!DOCTYPE html> <html> <body> <h1>This is a heading</h1> <p>This is some text in a paragraph.</p> </body> </html>
#)# This is a heading This is some text in a paragraph
#, ##, ### …**This will be bold**)*This will be italic*)[description](http://example.com)code (`This will be some inline coding stuff`)``` This is *verbatim* code # Even headers are not interpreted ```
Help > Cheatsheets menu
Before writing your own Rmarkdown document, use the excellent ressource on commonmark.org to learn the basics of markdown formatting.
An alternative online ressource can be found on www.markdowntutorial.com
A Rmarkdown document document contains 3 elements:
```)```{r} is the minimum to define a starting R chunkTo integrate small pieces of R codes
`) combined to the keyword r (`r <your R code>`)1 + 1 = `r 1+1` to render 1 + 1 = 2.rmarkdown::render()
css files
.tex)| Format | File extension |
|---|---|
| MODS | .mods |
| BibLaTeX | .bib |
| BibTeX | .bibtex |
| RIS | .ris |
| EndNote | .enl |
| EndNote XML | .xml |
| ISI | .wos |
| MEDLINE | .medline |
| Copac | .copac |
| JSON citeproc | .json |
[]@csl) files
--- title: "Sample Document" output: html_document bibliography: bibliography.bib csl: nature.csl --- Insert your reference [@my-reference] like I did.
---
title: "My Document"
output: html_document
params:
lines: 10
show_table: no
data:
label: "Input dataset:"
value: mtcars.csv
input: file
---
shiny package)
iosp)### level 3 headers with attributes ({}))## Slide with columns and boxes
IOSlides Plus extends `ioslides_presentation` and allows to easily create boxes:
### Box 1{.box-4 .bg-red}
Test 1
### Box 2{.box-6 .bg-green}
- line 1
- line 2
### Box 3{.box-6 .bg-blue}
This box has again a width of 6 col: it will be rendered in a new row.
IOSlides Plus extends ioslides_presentation and allows to easily create boxes:
Test 1
This box has again a width of 6 col: it will be rendered in a new row.